Iron Absorption in Microorganisms

Some microorganisms release compounds called “siderophores” into the extracellular environment when they are deficient in iron. Siderophores absorb iron from the surrounding environment, which is then transferred to the microorganism across its cellular membrane.

Form/Organization/System:: Environmental improvement

Defense/Stability:: Pest control、Microbe/germ resistance

Coexistence with nature

Yokota S. Kagaku to Seibutsu. Sci and Bio. 2003(41:5):289-291.

When siderophore-producing microorganisms are bred in soil, non-siderophore-producing microorganisms become iron deficient. We can advance pesticide-free agricultural practices by harnessing the ability to suppress pathogenic bacteria activity in soil by depriving it of the iron needed for proper functioning. The same principle can be applied to research on organisms that assimilate metal substances besides iron, leading to detoxification technology for heavy-metal pollution (including lead pollution).

Query	Affected	Num. rows	Took (ms)	Actions
SHOW FULL COLUMNS FROM `contents`	16	16	2	maybe slow
SELECT CHARACTER_SET_NAME FROM INFORMATION_SCHEMA.COLLATIONS WHERE COLLATION_NAME= 'utf8_general_ci';	1	1	1
SHOW FULL COLUMNS FROM `users`	10	10	1	maybe slow
SHOW FULL COLUMNS FROM `groups`	4	4	1	maybe slow
SHOW FULL COLUMNS FROM `permissions`	5	5	1	maybe slow
SHOW FULL COLUMNS FROM `groups_permissions`	3	3	1	maybe slow
SHOW FULL COLUMNS FROM `groups_users`	3	3	1	maybe slow
SHOW FULL COLUMNS FROM `contents_searches`	6	6	1	maybe slow
SHOW FULL COLUMNS FROM `attachments`	11	11	1	maybe slow
SHOW FULL COLUMNS FROM `attachments_revs`	13	13	1	maybe slow
SHOW FULL COLUMNS FROM `contents_related_items`	5	5	13	maybe slow
SHOW FULL COLUMNS FROM `related_items`	6	6	1	maybe slow
SHOW FULL COLUMNS FROM `contents_related_items_revs`	8	8	1	maybe slow
SHOW FULL COLUMNS FROM `contents_tags`	5	5	9	maybe slow
SHOW FULL COLUMNS FROM `tags`	7	7	1	maybe slow
SHOW FULL COLUMNS FROM `tag_groups`	6	6	1	maybe slow
SHOW FULL COLUMNS FROM `contents_tags_revs`	7	7	1	maybe slow
SHOW FULL COLUMNS FROM `contents_revs`	18	18	1	maybe slow
SELECT `Content`.`id`, `Content`.`user_id`, `Content`.`last_edit_user_id`, `Content`.`post_date`, `Content`.`post_date_year`, `Content`.`post_date_month`, `Content`.`post_date_day`, `Content`.`title`, `Content`.`title_en`, `Content`.`content`, `Content`.`plain_content`, `Content`.`page_view`, `Content`.`flag`, `Content`.`mod_count`, `Content`.`created`, `Content`.`modified` FROM `contents` AS `Content` WHERE `id` = 34 LIMIT 1	1	1	0
SELECT `Attachment`.`file_name`, `Attachment`.`dir`, `Attachment`.`model`, `Attachment`.`foreign_key` FROM `attachments` AS `Attachment` WHERE `file_name` <> 'default.jpg' AND `Attachment`.`foreign_key` = (34)	1	1	0
SELECT `ContentsRelatedItem`.`content`, `ContentsRelatedItem`.`related_item_id`, `ContentsRelatedItem`.`content_id` FROM `contents_related_items` AS `ContentsRelatedItem` WHERE `ContentsRelatedItem`.`content_id` = (34)	12	12	0
SELECT `RelatedItem`.`code`, `RelatedItem`.`name` FROM `related_items` AS `RelatedItem` WHERE `RelatedItem`.`id` = 1	1	1	0
SELECT `RelatedItem`.`code`, `RelatedItem`.`name` FROM `related_items` AS `RelatedItem` WHERE `RelatedItem`.`id` = 2	1	1	0
SELECT `RelatedItem`.`code`, `RelatedItem`.`name` FROM `related_items` AS `RelatedItem` WHERE `RelatedItem`.`id` = 5	1	1	0
SELECT `RelatedItem`.`code`, `RelatedItem`.`name` FROM `related_items` AS `RelatedItem` WHERE `RelatedItem`.`id` = 6	1	1	0
SELECT `RelatedItem`.`code`, `RelatedItem`.`name` FROM `related_items` AS `RelatedItem` WHERE `RelatedItem`.`id` = 7	1	1	0
SELECT `RelatedItem`.`code`, `RelatedItem`.`name` FROM `related_items` AS `RelatedItem` WHERE `RelatedItem`.`id` = 8	1	1	0
SELECT `RelatedItem`.`code`, `RelatedItem`.`name` FROM `related_items` AS `RelatedItem` WHERE `RelatedItem`.`id` = 9	1	1	0
SELECT `RelatedItem`.`code`, `RelatedItem`.`name` FROM `related_items` AS `RelatedItem` WHERE `RelatedItem`.`id` = 9	1	1	0
SELECT `RelatedItem`.`code`, `RelatedItem`.`name` FROM `related_items` AS `RelatedItem` WHERE `RelatedItem`.`id` = 9	1	1	0
SELECT `RelatedItem`.`code`, `RelatedItem`.`name` FROM `related_items` AS `RelatedItem` WHERE `RelatedItem`.`id` = 4	1	1	0
SELECT `RelatedItem`.`code`, `RelatedItem`.`name` FROM `related_items` AS `RelatedItem` WHERE `RelatedItem`.`id` = 11	1	1	0
SELECT `RelatedItem`.`code`, `RelatedItem`.`name` FROM `related_items` AS `RelatedItem` WHERE `RelatedItem`.`id` = 12	1	1	0
SELECT `ContentsTag`.`id`, `ContentsTag`.`tag_group_id`, `ContentsTag`.`mod_count`, `ContentsTag`.`tag_id`, `ContentsTag`.`content_id` FROM `contents_tags` AS `ContentsTag` WHERE `ContentsTag`.`content_id` = (34)	4	4	0
SELECT `Tag`.`name`, `Tag`.`comment`, `Tag`.`tag_group_id` FROM `tags` AS `Tag` WHERE `Tag`.`id` = 47	1	1	0
SELECT `TagGroup`.`code`, `TagGroup`.`name` FROM `tag_groups` AS `TagGroup` WHERE `TagGroup`.`id` = 4	1	1	0
SELECT `Tag`.`name`, `Tag`.`comment`, `Tag`.`tag_group_id` FROM `tags` AS `Tag` WHERE `Tag`.`id` = 62	1	1	0
SELECT `TagGroup`.`code`, `TagGroup`.`name` FROM `tag_groups` AS `TagGroup` WHERE `TagGroup`.`id` = 6	1	1	0
SELECT `Tag`.`name`, `Tag`.`comment`, `Tag`.`tag_group_id` FROM `tags` AS `Tag` WHERE `Tag`.`id` = 72	1	1	0
SELECT `TagGroup`.`code`, `TagGroup`.`name` FROM `tag_groups` AS `TagGroup` WHERE `TagGroup`.`id` = 6	1	1	0
SELECT `Tag`.`name`, `Tag`.`comment`, `Tag`.`tag_group_id` FROM `tags` AS `Tag` WHERE `Tag`.`id` = 100	1	1	0
SELECT `TagGroup`.`code`, `TagGroup`.`name` FROM `tag_groups` AS `TagGroup` WHERE `TagGroup`.`id` = 7	1	1	0
SELECT `RelatedItem`.`id`, `RelatedItem`.`code`, `RelatedItem`.`name`, `RelatedItem`.`created`, `RelatedItem`.`modified`, `RelatedItem`.`flag` FROM `related_items` AS `RelatedItem` WHERE `code` = 'function' LIMIT 1	1	1	0
SELECT `Content`.`id`, `Content`.`title`, `Content`.`title_en` FROM `contents` AS `Content` WHERE id = (NULL) ORDER BY `id` desc	0	0	0

Message	Memory use
Component intitailization	6.79 MB
Controller action start	6.83 MB
Controller render start	6.91 MB
View render complete	7.93 MB

Message	Time in ms	Graph
Core Processing (Derived)	293.08
Component initialization and startup	15.77
Controller action	44.34
Render Controller Action	59.53
» Rendering View	55.73
» » Rendering APP/views/contents/view.ctp	36.02
» » Rendering APP/views/layouts/default.ctp	17.81
» » » Rendering APP/views/elements/header.ctp	1.46
» » » Rendering APP/views/elements/content_sidebar.ctp	0.33
» » » Rendering APP/views/elements/footer.ctp	0.54

Iron Absorption in Microorganisms

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