Light-Responsive Archaea

Archaea can sense light on account of the rhodpsin (a variety-specific protein) in their cell membranes.

Resouce/Energy/Information Collection & Storage:: Uses light energy

Other

Rhodpsin can be used to develop protein models capable sensing light. It can also be used to develop medication for animals’ eyes.

: A common species of archaea, known as Sulfolobus (Photo courtesy of Sugimori K. Toho University School of Medicine, from the Onsen Biseibutsu Virtual Laboratory and Sugimori K. Sosetsu: onsen no seibutsu-gaku. Onsen kagaku. 1994; (44.4):159-182.
From the Amazing Nature Database.

: A lake in California with high salt concentration where archaea exist. Photo by AlishaV / CC BY 2.0
From the Amazing Nature Database.

History
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Request History
4 previous requests available
====
Session
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Session
- Config
  userAgent146b278961f0b80dc105e136efd48481
  time1714159526
  timeout10
====
Request
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Request

Cake Params
- controllercontents
- actionview
- named(empty)
- pass
 078
- plugin(null)
- form(empty)
- url
 urlcontents/view/78
- isAjax(false)
$_GET
- urlcontents/view/78
Cookie
- 0(empty)
Current Route
- keys
 0controller
 1action
- options(empty)
- defaults
 plugin(null)
 actionindex
- template/:controller/:action/*
- _greedy(true)
- _compiledRoute#^/(?:([^/]+))/(?:([^/]+))(?:/(?P<_args_>.*))?[/]*$#
- __headerMap
 typecontent_type
 methodrequest_method
 serverserver_name
====

Sql Log

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Sql Logs

default

Query	Affected	Num. rows	Took (ms)	Actions
SHOW FULL COLUMNS FROM `contents`	16	16	2	maybe slow
SELECT CHARACTER_SET_NAME FROM INFORMATION_SCHEMA.COLLATIONS WHERE COLLATION_NAME= 'utf8_general_ci';	1	1	10	maybe slow
SHOW FULL COLUMNS FROM `users`	10	10	1	maybe slow
SHOW FULL COLUMNS FROM `groups`	4	4	1	maybe slow
SHOW FULL COLUMNS FROM `permissions`	5	5	3	maybe slow
SHOW FULL COLUMNS FROM `groups_permissions`	3	3	9	maybe slow
SHOW FULL COLUMNS FROM `groups_users`	3	3	1	maybe slow
SHOW FULL COLUMNS FROM `contents_searches`	6	6	1	maybe slow
SHOW FULL COLUMNS FROM `attachments`	11	11	10	maybe slow
SHOW FULL COLUMNS FROM `attachments_revs`	13	13	1	maybe slow
SHOW FULL COLUMNS FROM `contents_related_items`	5	5	1	maybe slow
SHOW FULL COLUMNS FROM `related_items`	6	6	1	maybe slow
SHOW FULL COLUMNS FROM `contents_related_items_revs`	8	8	9	maybe slow
SHOW FULL COLUMNS FROM `contents_tags`	5	5	1	maybe slow
SHOW FULL COLUMNS FROM `tags`	7	7	13	maybe slow
SHOW FULL COLUMNS FROM `tag_groups`	6	6	1	maybe slow
SHOW FULL COLUMNS FROM `contents_tags_revs`	7	7	1	maybe slow
SHOW FULL COLUMNS FROM `contents_revs`	18	18	13	maybe slow
SELECT `Content`.`id`, `Content`.`user_id`, `Content`.`last_edit_user_id`, `Content`.`post_date`, `Content`.`post_date_year`, `Content`.`post_date_month`, `Content`.`post_date_day`, `Content`.`title`, `Content`.`title_en`, `Content`.`content`, `Content`.`plain_content`, `Content`.`page_view`, `Content`.`flag`, `Content`.`mod_count`, `Content`.`created`, `Content`.`modified` FROM `contents` AS `Content` WHERE `id` = 78 LIMIT 1	1	1	0
SELECT `Attachment`.`file_name`, `Attachment`.`dir`, `Attachment`.`model`, `Attachment`.`foreign_key` FROM `attachments` AS `Attachment` WHERE `file_name` <> 'default.jpg' AND `Attachment`.`foreign_key` = (78)	2	2	0
SELECT `ContentsRelatedItem`.`content`, `ContentsRelatedItem`.`related_item_id`, `ContentsRelatedItem`.`content_id` FROM `contents_related_items` AS `ContentsRelatedItem` WHERE `ContentsRelatedItem`.`content_id` = (78)	12	12	0
SELECT `RelatedItem`.`code`, `RelatedItem`.`name` FROM `related_items` AS `RelatedItem` WHERE `RelatedItem`.`id` = 1	1	1	0
SELECT `RelatedItem`.`code`, `RelatedItem`.`name` FROM `related_items` AS `RelatedItem` WHERE `RelatedItem`.`id` = 2	1	1	0
SELECT `RelatedItem`.`code`, `RelatedItem`.`name` FROM `related_items` AS `RelatedItem` WHERE `RelatedItem`.`id` = 5	1	1	0
SELECT `RelatedItem`.`code`, `RelatedItem`.`name` FROM `related_items` AS `RelatedItem` WHERE `RelatedItem`.`id` = 6	1	1	0
SELECT `RelatedItem`.`code`, `RelatedItem`.`name` FROM `related_items` AS `RelatedItem` WHERE `RelatedItem`.`id` = 7	1	1	10	maybe slow
SELECT `RelatedItem`.`code`, `RelatedItem`.`name` FROM `related_items` AS `RelatedItem` WHERE `RelatedItem`.`id` = 8	1	1	0
SELECT `RelatedItem`.`code`, `RelatedItem`.`name` FROM `related_items` AS `RelatedItem` WHERE `RelatedItem`.`id` = 9	1	1	0
SELECT `RelatedItem`.`code`, `RelatedItem`.`name` FROM `related_items` AS `RelatedItem` WHERE `RelatedItem`.`id` = 9	1	1	0
SELECT `RelatedItem`.`code`, `RelatedItem`.`name` FROM `related_items` AS `RelatedItem` WHERE `RelatedItem`.`id` = 9	1	1	0
SELECT `RelatedItem`.`code`, `RelatedItem`.`name` FROM `related_items` AS `RelatedItem` WHERE `RelatedItem`.`id` = 4	1	1	0
SELECT `RelatedItem`.`code`, `RelatedItem`.`name` FROM `related_items` AS `RelatedItem` WHERE `RelatedItem`.`id` = 11	1	1	0
SELECT `RelatedItem`.`code`, `RelatedItem`.`name` FROM `related_items` AS `RelatedItem` WHERE `RelatedItem`.`id` = 12	1	1	0
SELECT `ContentsTag`.`id`, `ContentsTag`.`tag_group_id`, `ContentsTag`.`mod_count`, `ContentsTag`.`tag_id`, `ContentsTag`.`content_id` FROM `contents_tags` AS `ContentsTag` WHERE `ContentsTag`.`content_id` = (78)	2	2	0
SELECT `Tag`.`name`, `Tag`.`comment`, `Tag`.`tag_group_id` FROM `tags` AS `Tag` WHERE `Tag`.`id` = 3	1	1	0
SELECT `TagGroup`.`code`, `TagGroup`.`name` FROM `tag_groups` AS `TagGroup` WHERE `TagGroup`.`id` = 1	1	1	0
SELECT `Tag`.`name`, `Tag`.`comment`, `Tag`.`tag_group_id` FROM `tags` AS `Tag` WHERE `Tag`.`id` = 175	1	1	0
SELECT `TagGroup`.`code`, `TagGroup`.`name` FROM `tag_groups` AS `TagGroup` WHERE `TagGroup`.`id` = 7	1	1	0
SELECT `RelatedItem`.`id`, `RelatedItem`.`code`, `RelatedItem`.`name`, `RelatedItem`.`created`, `RelatedItem`.`modified`, `RelatedItem`.`flag` FROM `related_items` AS `RelatedItem` WHERE `code` = 'function' LIMIT 1	1	1	0
SELECT `Content`.`id`, `Content`.`title`, `Content`.`title_en` FROM `contents` AS `Content` WHERE id = (NULL) ORDER BY `id` desc	0	0	0

Query Explain:

Click an "Explain" link above, to see the query explanation.

====

Timer

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Memory

Peak Memory Use 8.85 MB

Message	Memory use
Component intitailization	6.79 MB
Controller action start	6.83 MB
Controller render start	6.90 MB
View render complete	7.92 MB

Timers

Total Request Time: 813 (ms)

Message	Time in ms	Graph
Core Processing (Derived)	398.49
Component initialization and startup	16.05
Controller action	40.94
Render Controller Action	62.27
» Rendering View	58.65
» » Rendering APP/views/contents/view.ctp	26.46
» » Rendering APP/views/layouts/default.ctp	17.70
» » » Rendering APP/views/elements/header.ctp	1.46
» » » Rendering APP/views/elements/content_sidebar.ctp	0.40
» » » Rendering APP/views/elements/footer.ctp	0.43

====

Log
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Logs

====
Variables
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View Variables
- content
 contentsTags
 0
 id1567
 tag_group_id1
 mod_count3
 tag_id3
 content_id78
 Tag
 nameUses light energy
 comment(null)
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 TagGroup
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 nameResources/Energy/Information Collection or Storage
 1
 id1568
 tag_group_id7
 mod_count3
 tag_id175
 content_id78
 Tag
 nameOther
 comment
 tag_group_id7
 TagGroup
 codeenv_sol
 nameEnvironmental Solution Classification
 attachments
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 file_nameMQ==.jpeg
 dirimg/Content/78
 modelContent
 foreign_key78
 1
 file_nameMg==.jpeg
 dirimg/Content/78
 modelContent
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 contentsRelatedItems
 function
 0Archaea can sense light on account of the rhodpsin (a variety-specific protein) in their cell membranes.
 ref_info
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 appl_tech_sugg
 0Rhodpsin can be used to develop protein models capable sensing light. It can also be used to develop medication for animals’ eyes.
 img_exp
 0A common species of archaea, known as Sulfolobus (Photo courtesy of Sugimori K. Toho University School of Medicine, from the Onsen Biseibutsu Virtual Laboratory and Sugimori K. Sosetsu: onsen no seibutsu-gaku. Onsen kagaku. 1994; (44.4):159-182. From the Amazing Nature Database.
 1A lake in California with high salt concentration where archaea exist. Photo by <a href="http://www.flickr.com/photos/alishav/" target="_blank">AlishaV</a> / <a href="http://creativecommons.org/licenses/by/2.0/" target="_blank">CC BY 2.0</a> From the Amazing Nature Database.
 2
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 properties
 id78
 user_id1
 last_edit_user_id1
 post_date2011-02-04
 post_date_year
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 titleLight-Responsive Archaea
 title_en
 content
 plain_content
 page_view0
 flag1
 mod_count3
 created2011-02-04 18:20:19
 modified2012-03-16 13:06:48
- related_contentsArray
- Auth(null)
- $this->data(null)
- $this->validationErrors(empty)
- Loaded Helpers
 0simpleGraph
 1number
 2htmlToolbar
 3toolbar
 4navi
 5layout
 6session
 7form
 8contentElement
 9javascript
 10html
====

Light-Responsive Archaea

Request History

Session

Request

Cake Params

$_GET

Cookie

Current Route

Sql Logs

default

Query Explain:

Memory

Timers

Logs

View Variables